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Author	SHA1	Message	Date
James E McClure	39feb20ec9	add membrane unpack function	2022-03-07 16:47:19 -05:00
James E McClure	f270604e6b	add membrane transport function for d3q7	2022-03-07 15:36:16 -05:00
James E McClure	5b33e96984	update build script for summit	2021-12-21 15:49:11 -05:00
James E McClure	7523114937	merge color profiling	2021-12-21 11:38:16 -05:00
James McClure	bb4ce1aa09	fix string with gcc 10.2	2021-12-16 20:35:06 -05:00
James E McClure	21ca163c35	update mrt model	2021-09-02 11:16:24 -04:00
James McClure	47050feb49	remove random array functionality	2021-09-02 08:19:54 -04:00
James McClure	1f66d5a74c	update cascades scrit	2021-08-30 08:37:47 -04:00
James McClure	68d678f4fb	Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA	2021-08-30 08:23:16 -04:00
James E McClure	cd96365cd1	save state	2021-07-19 13:17:39 -04:00
James McClure	43cd9f3966	Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA	2021-06-30 14:12:25 -04:00
James McClure	7fa1588b50	Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA	2021-06-30 09:12:46 -04:00
James McClure	66ac708cfb	troubleshoot bug with flooding protocol	2021-06-23 13:21:38 -04:00
James E McClure	bdccde3ee9	add installation guide	2021-06-21 15:06:04 -04:00
James E McClure	c7c0bdf9d3	add installation guide	2021-06-21 14:50:03 -04:00
James McClure	d337023fd9	fix loop in lbpm_color_Simulator	2021-06-13 13:40:02 -04:00
James McClure	8327ff9d38	fractional flow protocl with endpoint termination	2021-06-13 10:08:32 -04:00
James McClure	9d968ee2ca	fix a few bugs	2021-06-11 17:29:07 -04:00
James E McClure	5c474b1285	fix bug in film	2021-06-04 10:10:56 -04:00
James E McClure	96ddd52b07	fix bug in film	2021-06-04 09:53:36 -04:00
James E McClure	f5fbde02d4	fix issue with film in timelog.csv	2021-06-03 16:19:31 -04:00
James E McClure	dffa98cb0b	added films to timelog.csv in color	2021-06-02 15:09:51 -04:00
James E McClure	498993ed73	compile gpu lee model	2021-03-31 19:13:33 -04:00
James E McClure	cde3741e53	fix some cuda compile bugs for lee model	2021-03-31 13:39:27 -04:00
James E McClure	dd94f96215	Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA	2021-03-31 13:03:56 -04:00
James E McClure	c581146f1b	Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA	2021-03-26 21:31:25 -04:00
James McClure	32d750a04c	GPU build for lee model	2021-03-22 10:45:30 -04:00
James McClure	16fe8ccbc3	Merge branch 'FOM' of github.com:JamesEMcClure/LBPM-WIA into FOM	2021-02-12 14:27:55 -05:00
James McClure	317f5f3bbe	add SCAL wetting convention	2021-02-12 14:27:49 -05:00
James McClure	0dae32f3c4	skeleton freelee build for gpu	2021-02-12 10:05:00 -05:00
James McClure	90afe56ead	add mixed gradient to cuda	2021-01-22 20:08:34 -05:00
James McClure	31234ed003	fix multiple init	2021-01-15 14:41:10 -05:00
James E McClure	cdc7d7d8e4	summit configure	2021-01-15 12:30:45 -05:00
James McClure	e57a59eab9	move to cuda directory	2021-01-14 14:55:51 -05:00
James McClure	f8881e35ed	fixing some bugs in analysis	2021-01-14 14:54:21 -05:00
James McClure	6252822da2	adding analysis capabilities for electrochemistry	2020-12-26 14:00:17 -05:00
James McClure	5dfd2de344	Merge branch 'LeeModel' of github.com:JamesEMcClure/LBPM-WIA into LeeModel	2020-10-09 15:05:54 -04:00
James McClure	7244258135	merging greyscale and electrokinetic in ScaLBL	2020-10-09 15:05:14 -04:00
James McClure	896a3617b8	adding dedicated analysis for grey model (broken)	2020-10-08 13:14:01 -04:00
James McClure	fd3663628d	adding grey analysis tools	2020-10-08 13:13:31 -04:00
James McClure	8b095b24ad	added mix gradient	2020-10-05 14:36:26 -04:00
James McClure	c232f076dc	adding wide halo gradient test	2020-10-01 16:41:17 -04:00
James McClure	cc654bb54b	adding wide halo gradient test	2020-10-01 16:36:16 -04:00
James McClure	1c1155d3b7	debug halo width	2020-09-30 15:15:57 -04:00
James McClure	5ed82a54f4	fix failing commm test	2020-09-30 15:14:28 -04:00
James McClure	0c594fa33d	add halo to memory optimized layout	2020-09-30 14:45:51 -04:00
James McClure	7c16a76d1c	update pointer in tests	2020-09-30 12:00:58 -04:00
James McClure	9f1e170a47	update pointer in tests	2020-09-30 11:57:25 -04:00
James McClure	e54ab8e195	update pointer in tests	2020-09-30 11:54:44 -04:00
James McClure	fed2fc4304	update pointer in tests	2020-09-30 11:53:28 -04:00
James McClure	8d8a22a374	add test wide halo	2020-09-30 11:46:23 -04:00
James McClure	dfa0d33180	add test color grad	2020-09-30 11:45:17 -04:00
James McClure	e69f2db777	add map to widehalo	2020-09-30 09:06:15 -04:00
James McClure	3126318900	building wide halo class	2020-09-29 16:35:09 -04:00
James McClure	5c72374278	fixing compile bugs	2020-09-29 13:40:41 -04:00
James McClure	917be9f6c4	fixing compile bugs	2020-09-29 13:37:02 -04:00
James McClure	cf1cf4eb53	fixing compile bugs	2020-09-29 13:29:14 -04:00
James McClure	a3aadd947e	fixing compile bugs	2020-09-29 13:25:53 -04:00
James McClure	e4bdc864c6	fixing compile bugs	2020-09-29 11:05:09 -04:00
James McClure	229accee9c	fixing compile bugs	2020-09-29 11:00:42 -04:00
James McClure	c722aeb1bb	fixing compile bugs	2020-09-29 10:58:33 -04:00
James McClure	afa9dac22a	fixing compile bugs	2020-09-29 10:56:01 -04:00
James McClure	bfcd85af84	fixing compile bugs	2020-09-29 10:48:54 -04:00
James McClure	23f6c089f0	fix name of function	2020-09-29 10:43:31 -04:00
James McClure	6b335eaf28	add wide halo class	2020-09-29 10:39:05 -04:00
James McClure	a69504f96a	fixed weird type in ScaLBL (revert)	2020-09-29 09:43:38 -04:00
James McClure	0b94f29d58	fixed weird type in ScaLBL	2020-09-28 15:44:22 -04:00
James McClure	92d56af3b4	template for freelee model	2020-09-25 16:18:54 -04:00
James McClure	85844ec8e3	template for read from file	2020-09-23 15:21:15 -04:00
James McClure	fd27b3138a	tweak BC conventions	2020-09-23 14:53:46 -04:00
James McClure	11be793575	use periodic BC in ScaLBL (model specific BC possible)	2020-09-23 12:30:22 -04:00
James McClure	0d6231f1cb	read BC from model database	2020-09-22 14:33:51 -04:00
James McClure	b64431f335	Merge branch 'master' into Greyscale_stable	2020-08-31 16:12:51 -04:00
James McClure	75e8647051	re-factor electric solvers for unit testing	2020-08-28 13:31:43 -04:00
James McClure	30014a49c0	add zeta potential to Poisson	2020-08-11 16:52:56 -04:00
James McClure	e0b0e05664	added bounce-back interaction capability	2020-08-11 15:16:40 -04:00
James McClure	3592ac7562	distinguish parallel comm / bounceback sites at halo	2020-08-11 14:35:46 -04:00
James McClure	b4d50ee821	example for how to structure ion comm loop	2020-08-10 12:54:55 -04:00
James McClure	d9cde3c76c	use generalized D3Q7 MPI structures for multi-ion	2020-08-06 16:12:18 -04:00
James McClure	082a0a30f5	Adding skeleton for electrokinetic LBM	2020-08-06 15:42:36 -04:00
James McClure	5e6a9f552c	Adding skeleton for electrokinetic LBM	2020-08-06 15:41:40 -04:00
James E McClure	a1df2b57de	update subphase / minkowski for Euler	2020-08-03 07:08:14 -04:00
James McClure	d88455a854	distance from color, fix sign	2020-07-31 22:09:34 -04:00
James McClure	6e9b808925	adding option to refine distance with phase field	2020-07-29 10:03:16 -04:00
James McClure	9d333a7371	adding option to refine distance with phase field	2020-07-29 09:56:52 -04:00
James McClure	00c30866f5	copy electrokinetic from color	2020-07-29 09:53:39 -04:00
James E McClure	4d2174cedb	update Euler characteristic	2020-06-29 14:18:05 -04:00
James McClure	736870f4b5	still debugging Euler characteristic bug	2020-06-29 13:46:24 -04:00
James McClure	e11da909d6	use internal / external edge count in Euler characteristic	2020-06-29 11:07:55 -04:00
James McClure	9950201554	update cubes	2020-06-27 20:54:00 -04:00
James McClure	a3b23d246f	Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA	2020-06-27 15:16:21 -04:00
James McClure	07ea37d2f2	at device test	2020-06-27 15:16:13 -04:00
James McClure	64b12587c7	Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA	2020-06-24 13:49:11 -04:00
James McClure	534410bb29	add Minkowski to TestTorus	2020-06-24 13:48:53 -04:00
James McClure	5fae571578	fix connected pc	2020-06-18 19:56:38 -04:00
James McClure	2e47e9c306	fix bug in Euler characteristic at domain boundary	2020-06-07 20:54:09 -04:00
James E McClure	b31e51329e	Merge branch 'devel'	2020-05-22 13:13:26 -04:00
James E McClure	48fe85f4ef	fix force adaptation	2020-05-22 13:12:54 -04:00
James E McClure	55981b06ce	fix force adaptation	2020-05-22 13:11:50 -04:00
James McClure	09a9a05a87	enable force adaptation	2020-05-06 15:12:50 -04:00