Zhe Rex Li
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6959a02f7b
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correct ion LB collison
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2022-05-03 15:00:00 +10:00 |
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Zhe Rex Li
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47db000ba6
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correct D3Q7 Poisson LB algorithm
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2022-04-29 20:36:38 +10:00 |
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Zhe Li
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025987e53b
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make further corrections
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2022-04-28 23:59:13 +10:00 |
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Zhe Li
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bdd0efd36e
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build passed
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2022-04-28 16:55:58 +10:00 |
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Zhe Rex Li
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a00a3606f7
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add functionality for user to choose either D3Q7 or D3Q19 lattice for Poisson;to be built and tested
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2022-04-28 16:21:04 +10:00 |
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Zhe Li
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678925ec15
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correct use_membrane functionality
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2022-04-28 15:22:23 +10:00 |
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Zhe Li
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754b1ad9d9
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update executable list and NP_cell simulator
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2022-04-27 14:04:11 +10:00 |
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Zhe Rex Li
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86be316977
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merge membrane into test_poisson
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2022-04-27 12:04:53 +10:00 |
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James McClure
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8ea560ca66
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update cell db
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2022-04-26 19:01:30 -04:00 |
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James McClure
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e3518e3482
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added membrane properties to input db
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2022-04-26 18:07:26 -04:00 |
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James McClure
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3e82370d6c
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update cpu ion valence
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2022-04-26 06:37:08 -04:00 |
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Zhe Rex Li
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614b002725
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remove Stokes solver from cell simulator; need to test build
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2022-04-26 11:41:14 +10:00 |
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Zhe Rex Li
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17f80b4637
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merge the latest membrane into test_poisson
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2022-04-26 11:16:44 +10:00 |
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James E McClure
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429413ce3b
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fix charge density (i think)
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2022-04-24 16:48:12 -04:00 |
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James E McClure
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3642a6ae9b
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debug charge density problems on crusher
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2022-04-24 15:55:23 -04:00 |
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James E McClure
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9043751281
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debug crusher
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2022-04-24 14:55:59 -04:00 |
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James E McClure
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eadb420d06
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update hip
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2022-04-24 14:54:49 -04:00 |
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James E McClure
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91d8fbe751
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Merge branch 'membrane' of github.com:JamesEMcClure/LBPM-WIA into membrane
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2022-04-24 11:04:47 -04:00 |
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James McClure
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418bc82953
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fix poisson typo
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2022-04-24 11:04:33 -04:00 |
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James E McClure
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36a5204882
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a bunch of summit debug things to roll back later
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2022-04-24 11:04:11 -04:00 |
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James McClure
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dd5dbbd51c
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deprecate old error methods
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2022-04-24 11:00:17 -04:00 |
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James McClure
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d964eee29c
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update hip poisson solver
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2022-04-24 11:00:03 -04:00 |
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James E McClure
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0224ecdcff
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fix typo
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2022-04-22 20:41:49 -04:00 |
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James McClure
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cf4f2b63da
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update error analysis for Poisson solver
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2022-04-22 15:17:52 -04:00 |
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James McClure
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d3dc35c018
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fix bad ref to D3Q7
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2022-04-22 14:30:03 -04:00 |
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James McClure
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481a258fbd
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read Membrane ion concentration list
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2022-04-19 10:53:16 -04:00 |
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James McClure
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b51968c677
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print membrane input concentration
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2022-04-19 07:46:53 -04:00 |
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James McClure
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2cbb4ce8cd
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update print
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2022-04-19 07:33:21 -04:00 |
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James McClure
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7eaaced8d9
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add barriers to poisson solver
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2022-04-18 08:45:49 -04:00 |
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James McClure
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e613cba376
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remove print staetements
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2022-04-16 17:14:22 -04:00 |
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James McClure
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b183252947
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remove bad warnings
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2022-04-15 22:50:16 -04:00 |
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James McClure
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85e99df3f3
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add membrane concentration init
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2022-04-14 22:57:23 -04:00 |
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Zhe Li
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58e246c941
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fix bugs in importing ion model's dummy velocity
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2022-04-14 11:53:26 +10:00 |
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James McClure
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aa8783141d
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small change
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2022-04-13 20:39:59 -04:00 |
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Zhe Li
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e7c227bd9f
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fix bugs in initializing electric potential; the Psi on solid was accidentally overwritten before.
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2022-04-13 16:56:26 +10:00 |
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Zhe Li
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c281c0cfda
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fix dumb bugs
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2022-04-13 14:53:23 +10:00 |
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James McClure
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adeecbd122
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add GPU functions for d3q19 poisson
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2022-04-12 23:29:46 -04:00 |
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James McClure
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8fd8799ff9
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update cell example
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2022-04-12 20:51:13 -04:00 |
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Zhe Rex Li
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0f68c118de
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Poisson solver; enable specifying initial values
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2022-04-12 16:12:12 +10:00 |
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Zhe Li
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cc693c93f5
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fix a few syntax bugs and build passed
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2022-04-12 12:49:28 +10:00 |
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Zhe Rex Li
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e1ebbce812
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initialize nernst-planck simulator; to be built subject to debugging
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2022-04-12 11:40:39 +10:00 |
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James McClure
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032a21a872
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Poisson working pretty good now
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2022-04-10 22:21:34 -04:00 |
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James McClure
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d0e41bf834
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d319 poisson works good
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2022-04-10 17:25:29 -04:00 |
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James McClure
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eb1c5da99c
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still broken wang
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2022-04-10 16:08:35 -04:00 |
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James McClure
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cd970d64a3
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Merge branch 'membrane-rex-d3q19' into membrane-wang
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2022-04-10 12:34:31 -04:00 |
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James McClure
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b182d04833
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tau from wang paper
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2022-04-10 11:32:53 -04:00 |
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James McClure
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b3dfc014d8
|
rex d3q19 (broken)
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2022-04-10 11:05:53 -04:00 |
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James McClure
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9c63613373
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original wang poisson solver (broken)
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2022-04-10 09:51:02 -04:00 |
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James McClure
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2bb2be845a
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membrane starts working ok...
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2022-04-08 16:44:37 -04:00 |
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James McClure
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25b17f996c
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membrane transport test passing
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2022-04-06 22:43:42 -04:00 |
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